Accession
MI0007248
Description
Glycine max
gma-MIR1529 precursor miRNA
Sequence
1279
reads,
8.0
reads per million, 144 experiments
aauuagauguuaaucauuaauugucuaccuucacuauuuuauuaaacguuuaucguuACAUGUCACGAUUUUAUUaaacauuaauuuuauguaccuaauuaacguuaacuuccaauaaaauuaggaugcgugauaaucaacauuuaauaaaaguacgacacuuaacgaUUAAAGGAAACAAUUAAUCGUUAacguucaauu
((((.(((((((((.(((((((((.(.((((....................(((((((..((((....((((((((((..((.(((((((((((((((((..................))))))).))))))).))).))..))))))))))....))))..)))))))..))))).))))))))).))))))))).))))
((((.(((((((((.(((((((((.(.((((....................(((((((..((((....((((((((((..((.(((((((((((((((((..................))))))).))))))).))).))..))))))))))....))))..)))))))..))))).))))))))).))))))))).))))
Structure
a c c a cacuauuuuauuaaacguuu CA ACGA ca a - - aacguuaa
aauu gauguuaau auuaauugu u ccuu aucguuA UGUC UUUUAUUaaa uu auu uuaugua ccuaauu c
|||| ||||||||| ||||||||| | |||| ||||||| |||| |||||||||| || ||| ||||||| |||||||
uuaa uugcaAUUG UAAUUAACA A GGAA Uagcaau acag aaaauaauuu aa uaa agugcgu ggauuaa u
c C A - ------------------AU uc caug ac c u a aauaaccu
Annotation confidence
Low
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Genome context
chr1: 54737797-54737997 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from gma-MIR1529
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature gma-miR1529-5p
| Accession | MIMAT0054043 |
| Description | Glycine max gma-miR1529-5p mature miRNA |
| Sequence | 58 - ACAUGUCACGAUUUUAUU - 75 |
| Evidence |
experimental
unknown |
Mature gma-miR1529-3p
| Accession | MIMAT0007391 |
| Description | Glycine max gma-miR1529-3p mature miRNA |
| Sequence | 169 - UUAAAGGAAACAAUUAAUCGUUA - 191 |
| Evidence |
experimental
454 [1] |
References
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