miRBase entry: gma-MIR1529

Dead hairpin entry

Stem-loop gma-MIR1529


Accession
MI0007248
Description
Glycine max gma-MIR1529 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

1279 reads, 8.0 reads per million, 144 experiments
aauuagauguuaaucauuaauugucuaccuucacuauuuuauuaaacguuuaucguuACAUGUCACGAUUUUAUUaaacauuaauuuuauguaccuaauuaacguuaacuuccaauaaaauuaggaugcgugauaaucaacauuuaauaaaaguacgacacuuaacgaUUAAAGGAAACAAUUAAUCGUUAacguucaauu
((((.(((((((((.(((((((((.(.((((....................(((((((..((((....((((((((((..((.(((((((((((((((((..................))))))).))))))).))).))..))))))))))....))))..)))))))..))))).))))))))).))))))))).))))

Structure
    a         c         c a    cacuauuuuauuaaacguuu       CA    ACGA          ca  a   -       -       aacguuaa 
aauu gauguuaau auuaauugu u ccuu                    aucguuA  UGUC    UUUUAUUaaa  uu auu uuaugua ccuaauu        c
|||| ||||||||| ||||||||| | ||||                    |||||||  ||||    ||||||||||  || ||| ||||||| |||||||         
uuaa uugcaAUUG UAAUUAACA A GGAA                    Uagcaau  acag    aaaauaauuu  aa uaa agugcgu ggauuaa        u
    c         C         A -    ------------------AU       uc    caug          ac  c   u       a       aauaaccu