miRBase entry: gma-MIR1532

Stem-loop gma-MIR1532


Accession
MI0007251
Description
Glycine max gma-MIR1532 precursor miRNA


Sequence

3566 reads, 12.0 reads per million, 155 experiments
ucaacucauucucucgcguagcguguagcgcgugcuAAACGAGACGUUAAGCACGAGAGUcagaauccguuacucgcgcacagcgcacagcacagacuaaguggacaaaacugacacagAACACGCUAAGCGAGAGGAGCUCgcuaagcaca
........(((((((((.((((((((..(.((((((.((((...)))).)))))).).(((((..(((((((.((((((...))))........)).))).)))).....))))).....)))))))).)))))))))..............

Structure
------ucaacuca         g        -------------------------------------------------------------ag g      A    A 
              uucucucgc uagcgugu                                                               c cgugcu AACG  
              ||||||||| ||||||||                                                               | |||||| |||| G
              AGGAGAGCG AUCGCACA                                                               G GCACGA UUGC  
acacgaaucgCUCG         A        AgacacagucaaaacaggugaaucagacacgacacgcgacacgcgcucauugccuaagacUGA A      A    A 


Annotation confidence Low
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Genome context
chr13: 43766192-43766343 [+]

Database links

Mature gma-miR1532-5p

Accession MIMAT0054045
Description Glycine max gma-miR1532-5p mature miRNA
Sequence 37 - AAACGAGACGUUAAGCACGAGAGU - 60
Evidence experimental
unknown

Mature gma-miR1532-3p

Accession MIMAT0007394
Description Glycine max gma-miR1532-3p mature miRNA
Sequence 120 - AACACGCUAAGCGAGAGGAGCUC - 142
Evidence experimental
454 [1]

References

  1. PubMed ID: 18402695
    Novel and nodulation-regulated microRNAs in soybean roots
    Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O
    BMC Genomics (2008) 9:160