Dead hairpin entry

Stem-loop gma-MIR1520c

Accession

MI0007252

Description

Glycine max gma-MIR1520c precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

3 open access papers mention gma-MIR1520c
(3 sentences)

Sequence

48151 reads, 152.0 reads per million, 178 experiments

augaugacugucacgugucauauucugauugaucaauaaaaauaauaauacauuuuauuuuuuauGGAGUUGACAUCCAAUCAGAACAUgacacaugacaaacaucauucAAUAAGAACGUGACACGUGACAGUuaacau
(((.(((((((((((((((((.((((.(((((.....((((((((.........))))))))..((((.......)))).(((.....)))...((((......))))))))).)))).))))))))))))))))).)))

Structure

   a                 a    g     ucaauaaaaauaauaauacauuuuauuuuuua    GU 
aug ugacugucacgugucau uucu auuga                                uGGA  U
||| ||||||||||||||||| |||| |||||                                ||||  G
uac auUGACAGUGCACAGUG AAGA UAAcu                                ACCU  A
   a                 C    A     ---uacuacaaacaguacacagUACAAGACUA    AC