Dead hairpin entry

Stem-loop gma-MIR1533

Accession

MI0007253

Description

Glycine max gma-MIR1533 precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

2 open access papers mention gma-MIR1533
(5 sentences)

Sequence

2662 reads, 140.0 reads per million, 171 experiments

uguaaauuauucauauguuauuauuauuauugucacuaucaucaucaccuuuauuacuaucaccaucaccaucauugucucuaucaaugauaguggccaugaucaauaaugAUAAUAAAAAUAAUAAUGAuacuaauggu
.....((((((..((((((((((((.(((((((((...............(((((...((((...((((.(((((((.......))))))).))))...)))).)))))))))))))).))))))))).)))..))))))

Structure

uguaa      ca   -         a         cuaucaucaucaccu     acu    cca    c       uc 
     auuauu  uau guuauuauu uuauuguca               uuauu   auca   ucac aucauug  u
     ||||||  ||| ||||||||| |||||||||               |||||   ||||   |||| |||||||  c
     ugguaa  auA UAAUAAUAA AAUAAUAgu               aauaa   uagu   ggug uaguaac  u
-----      uc   G         A         ---------------     --c    acc    a       ua