Stem-loop gga-mir-1551

Accession

MI0007276

Description

Gallus gallus gga-mir-1551 precursor miRNA

Literature search

2 open access papers mention gga-mir-1551
(2 sentences)

Sequence

3503 reads, 3.0 reads per million, 156 experiments

aggaguuacuauagcUAGCAGCAAAAAGAACUUCAGAUgugauuaacuuggagcucUGAGUUUGUGUUGCUGCUUUCUUagugcucucuu
.(((((.((((.((..((((((((...(((((.((((.((..(......)..)))))))))))...))))))))..)))))))))))...

Structure

--a     u    u  cU        AAA     U    U  ga ua 
   ggagu acua ag  AGCAGCAA   GAACU CAGA gu  u  a
   ||||| |||| ||  ||||||||   ||||| |||| ||  |   
   ucucg ugaU UC  UCGUCGUU   UUUGA GUcu cg  g  c
uuc     -    -  UU        GUG     -    -  ag uu 

Annotation confidence High

Genome context

14: 5219680-5219769 [+]

Mature gga-miR-1551-5p

• Accession: MIMAT0007405
• Description: Gallus gallus gga-miR-1551-5p mature miRNA
• Sequence: 16 - UAGCAGCAAAAAGAACUUCAGAU - 38
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1551-3p

• Accession: MIMAT0007406
• Description: Gallus gallus gga-miR-1551-3p mature miRNA
• Sequence: 57 - UGAGUUUGUGUUGCUGCUUUCUU - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964