Stem-loop gga-mir-1551

Accession

MI0007276

Description

Gallus gallus gga-mir-1551 precursor miRNA

Literature search

1 open access papers mention gga-mir-1551
(1 sentences)

Sequence

301 reads, 3 reads per million, 5 experiments

aggaguuacuauagCUAGCAGCAAAAAGAACUUCAGAugugauuaacuuggagcucUGAGUUUGUGUUGCUGCUUUCUuagugcucucuu
.(((((.((((.((..((((((((...(((((.((((.((..(......)..)))))))))))...))))))))..)))))))))))...

Structure

--a     u    u  CU        AAA     U    u  ga ua 
   ggagu acua ag  AGCAGCAA   GAACU CAGA gu  u  a
   ||||| |||| ||  ||||||||   ||||| |||| ||  |   
   ucucg ugau UC  UCGUCGUU   UUUGA GUcu cg  g  c
uuc     -    -  UU        GUG     -    -  ag uu 

Annotation confidence Not enough data

Genome context

chr14: 5241007-5241096 [+]

Mature gga-miR-1551-5p

• Accession: MIMAT0007405
• Description: Gallus gallus gga-miR-1551-5p mature miRNA
• Sequence: 15 - CUAGCAGCAAAAAGAACUUCAGA - 37
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1551-3p

• Accession: MIMAT0007406
• Description: Gallus gallus gga-miR-1551-3p mature miRNA
• Sequence: 57 - UGAGUUUGUGUUGCUGCUUUCU - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964