Stem-loop gga-mir-1590

Accession

MI0007317

Description

Gallus gallus gga-mir-1590 precursor miRNA

Sequence

1273 reads, 2.0 reads per million, 183 experiments

uggauggaaauagguaucUCCAGAGAACAGUUUGUCCCACUUGuuuuugacgucugucguagcaAGGGACAAAUUGCUCUCUGGAAGUacauuucucca
((((..(((((..((((.((((((((.(((((((((((..(((((..((((....)))).)))))))))))))))).)))))))).)))))))))))))

Structure

    ug     ag    c        A           AC     uu    g 
ugga  gaaau  guau UCCAGAGA CAGUUUGUCCC  UUGuu  ugac u
||||  |||||  |||| |||||||| |||||||||||  |||||  ||||  
accu  cuuua  caUG AGGUCUCU GUUAAACAGGG  Aacga  gcug c
    --     --    A        C           --     -u    u 

Annotation confidence High

Genome context

6: 13210380-13210478 [-]

Mature gga-miR-1590-5p

• Accession: MIMAT0051230
• Description: Gallus gallus gga-miR-1590-5p mature miRNA
• Sequence: 19 - UCCAGAGAACAGUUUGUCCCACUUG - 43
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1590-3p

• Accession: MIMAT0007452
• Description: Gallus gallus gga-miR-1590-3p mature miRNA
• Sequence: 65 - AGGGACAAAUUGCUCUCUGGAAGU - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964