Stem-loop gga-mir-1596

Accession

MI0007323

Description

Gallus gallus gga-mir-1596 precursor miRNA

Literature search

2 open access papers mention gga-mir-1596
(5 sentences)

Sequence

7 reads, 0 reads per million, 1 experiments

uggacuuuguuucAUUCUCCUUCAAUCCAUCUUUGUcaugauuuacaaaaagaacAAAGGUGGCCGUGGGUGAAUGAagccaggcaucca
(((((((.(((((((((.(((.....((((((((((..(...........)..))))))))))....))).))))))))).)))..))))

Structure

    --   u         U   UCAAU          ca gauu 
ugga  cuu guuucAUUC CCU     CCAUCUUUGU  u    u
||||  ||| ||||||||| |||     ||||||||||  |    a
accu  gga cgaAGUAAG GGG     GGUGGAAAca  a    c
    ac   c         U   -UGCC          ag aaaa 

Annotation confidence Not enough data

Genome context

chr1: 5811652-5811741 [+]

Mature gga-miR-1596-5p

• Accession: MIMAT0007460
• Description: Gallus gallus gga-miR-1596-5p mature miRNA
• Sequence: 14 - AUUCUCCUUCAAUCCAUCUUUGU - 36
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1596-3p

• Accession: MIMAT0007461
• Description: Gallus gallus gga-miR-1596-3p mature miRNA
• Sequence: 56 - AAAGGUGGCCGUGGGUGAAUGA - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964