miRBase entry: gga-mir-1600

Stem-loop gga-mir-1600


Accession
MI0007327
Description
Gallus gallus gga-mir-1600 precursor miRNA


Sequence

gugaugcccacugguccccggugcuggcagcccugggaacugcccUGGGCUGACAACAGAGGGCCagaaucagguggcac
....((((..(((((((((..((.((.((((((.(((.....))).)))))).)).))..)))...).)))))..)))).

Structure
guga    ca     - ---   gg  c  g      u   a 
    ugcc  cuggu c   ccc  ug ug cagccc ggg a
    ||||  ||||| |   |||  || || |||||| ||| c
    acgg  gacua g   GGG  AC AC GUCGGG ccc u
---c    ug     a aCC   AG  A  A      U   g 


Annotation confidence Not enough data
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Genome context
chr1: 194366430-194366509 [+]

Database links

Mature gga-miR-1600

Accession MIMAT0007466
Description Gallus gallus gga-miR-1600 mature miRNA
Sequence 46 - UGGGCUGACAACAGAGGGCC - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964