Stem-loop gga-mir-1601

Accession

MI0007328

Description

Gallus gallus gga-mir-1601 precursor miRNA

Sequence

101 reads, 1.0 reads per million, 29 experiments

gucccccAGCUCUGCACGCCGUGCACUGAUuugucgcggcgaucgugucAGUGUGAGCAGGUGCAGAGCUGcaggac
((((..(((((((((((..(.(((((((((.(((((...))).)).))))))))).)...)))))))))))..))))

Structure

    cc           -GC G         u  -   c 
gucc  cAGCUCUGCAC   C UGCACUGAU ug ucg  
||||  |||||||||||   | ||||||||| || ||| g
cagg  GUCGAGACGUG   G GUGUGAcug gc agc  
    ac           GAC A         u  u   g 

Annotation confidence High

Genome context

24: 2067893-2067969 [+]

Mature gga-miR-1601-5p

• Accession: MIMAT0051232
• Description: Gallus gallus gga-miR-1601-5p mature miRNA
• Sequence: 8 - AGCUCUGCACGCCGUGCACUGAU - 30
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1601-3p

• Accession: MIMAT0007467
• Description: Gallus gallus gga-miR-1601-3p mature miRNA
• Sequence: 50 - AGUGUGAGCAGGUGCAGAGCUG - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964