Stem-loop gga-mir-1603

Accession

MI0007330

Description

Gallus gallus gga-mir-1603 precursor miRNA

Literature search

2 open access papers mention gga-mir-1603
(13 sentences)

Sequence

162 reads, 0.0 reads per million, 72 experiments

ugccuggagcugcuUACAGCACGCAGUCCCAGCCAGCUggcaggcgucuuccAGUGGUUGGUUUGGUGCUGUCgagcuguuccagca
(((.((((((.(((((((((((.(((..(((((((.((((.((....)).))))))))))).)))))))))).)))).)))))))))

Structure

   c      u    -       G   UC       G    c  g 
ugc uggagc gcuU ACAGCAC CAG  CCAGCCA CUgg ag c
||| |||||| |||| ||||||| |||  ||||||| |||| ||  
acg accuug cgag UGUCGUG GUU  GGUUGGU GAcc uc g
   -      u    C       -   -U       -    u  u 

Annotation confidence Medium

Genome context

7: 9814518-9814603 [-]

Mature gga-miR-1603-5p

• Accession: MIMAT0051233
• Description: Gallus gallus gga-miR-1603-5p mature miRNA
• Sequence: 15 - UACAGCACGCAGUCCCAGCCAGCU - 38
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1603-3p

• Accession: MIMAT0007469
• Description: Gallus gallus gga-miR-1603-3p mature miRNA
• Sequence: 53 - AGUGGUUGGUUUGGUGCUGUC - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964