Stem-loop gga-mir-1604

Accession

MI0007331

Description

Gallus gallus gga-mir-1604 precursor miRNA

Literature search

1 open access papers mention gga-mir-1604
(1 sentences)

Sequence

2032 reads, 2.0 reads per million, 129 experiments

ucugucccacugcaggcugUGGGCCCAGGGCUGUGCUGGAGAcaucccagugcccAGCCAGCCAUGGUCCUGCAGccuggggcccucuugguccaga
((((..(((((.(((((((((((.(((.(((((.(((((..((......))..)))))))))).))).))))))))))).))......)))..))))

Structure

    uc   ------  g           C   G     U     AG  au 
ucug  cca      cu caggcugUGGG CCA GGCUG GCUGG  Ac  c
||||  |||      || ||||||||||| ||| ||||| |||||  ||   
agac  ggu      gg guccGACGUCC GGU CCGAC CGAcc  ug  c
    cu   ucuccc  g           U   A     -     cg  ac 

Annotation confidence Medium

Genome context

1: 734201-734297 [+]

Mature gga-miR-1604-5p

• Accession: MIMAT0007470
• Description: Gallus gallus gga-miR-1604-5p mature miRNA
• Sequence: 20 - UGGGCCCAGGGCUGUGCUGGAGA - 42
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1604-3p

• Accession: MIMAT0051234
• Description: Gallus gallus gga-miR-1604-3p mature miRNA
• Sequence: 56 - AGCCAGCCAUGGUCCUGCAG - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964