Stem-loop gga-mir-1612

Accession

MI0007340

Description

Gallus gallus gga-mir-1612 precursor miRNA

Literature search

3 open access papers mention gga-mir-1612
(12 sentences)

Sequence

194 reads, 3.0 reads per million, 76 experiments

cuuuuaagcauccAAUUGGCUCUUUUCUUUCUUUCUuuuuuuaugguagAGGAAGGAAAAGGAGCUGACUGggcagcuuggagg
(((((((((.((((.(((((((((((...((((((((((........))))))))))))))))))))).))))..)))))))))

Structure

         -a    A           CUU          uuu 
cuuuuaagc  uccA UUGGCUCUUUU   UCUUUCUuuu   a
|||||||||  |||| |||||||||||   ||||||||||    
ggagguucg  ggGU AGUCGAGGAAA   AGGAAGGAga   u
         ac    C           ---          ugg 

Annotation confidence Medium

Genome context

9: 4639488-4639570 [+]

Mature gga-miR-1612-5p

• Accession: MIMAT0051237
• Description: Gallus gallus gga-miR-1612-5p mature miRNA
• Sequence: 14 - AAUUGGCUCUUUUCUUUCUUUCU - 36
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1612-3p

• Accession: MIMAT0007478
• Description: Gallus gallus gga-miR-1612-3p mature miRNA
• Sequence: 50 - AGGAAGGAAAAGGAGCUGACUG - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964