Stem-loop gga-mir-1613

Accession

MI0007341

Description

Gallus gallus gga-mir-1613 precursor miRNA

Sequence

447 reads, 1.0 reads per million, 106 experiments

ucagacugcuagcuggaauggACUGAUGUAGUGAAGAUGgugaaaacUACAUGCGUAUAUUCUGGCAGagagucuga
(((((((.((.(((((((((.((..(((((((.............)))))))..)).)))))))))..)))))))))

Structure

       g  -a         g  UG       GAAGA 
ucagacu cu  gcuggaaug AC  AUGUAGU     U
||||||| ||  ||||||||| ||  |||||||     G
agucuga ga  CGGUCUUAU UG  UACAUca     g
       -  GA         A  CG       aaagu 

Annotation confidence High

Genome context

2: 77477158-77477234 [+]

Mature gga-miR-1613-5p

• Accession: MIMAT0051238
• Description: Gallus gallus gga-miR-1613-5p mature miRNA
• Sequence: 22 - ACUGAUGUAGUGAAGAUG - 39
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1613-3p

• Accession: MIMAT0007479
• Description: Gallus gallus gga-miR-1613-3p mature miRNA
• Sequence: 48 - UACAUGCGUAUAUUCUGGCAG - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964