Stem-loop gga-mir-1620

Accession

MI0007349

Description

Gallus gallus gga-mir-1620 precursor miRNA

Literature search

1 open access papers mention gga-mir-1620
(2 sentences)

Sequence

253 reads, 1.0 reads per million, 83 experiments

ugcaauaugggcuugauccaaagccuguuuaagucaguggacugauucccaaugACUUUAAUGGGCUUUGGAUCACacccuaauugca
((((((..(((..((((((((((((((((.((((((.(((........))).)))))).))))))))))))))))..)))..))))))

Structure

      au   cu                u      g   acu 
ugcaau  ggg  ugauccaaagccuguu aaguca ugg   g
||||||  |||  |||||||||||||||| |||||| |||    
acguua  ccc  ACUAGGUUUCGGGUAA UUCAgu acc   a
      au   aC                U      a   cuu 

Annotation confidence Not enough data

Genome context

8: 18184823-18184910 [+]

Mature gga-miR-1620-3p

• Accession: MIMAT0007487
• Description: Gallus gallus gga-miR-1620-3p mature miRNA
• Sequence: 55 - ACUUUAAUGGGCUUUGGAUCAC - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964