miRBase entry: gga-mir-1624

Stem-loop gga-mir-1624


Accession
MI0007353
Description
Gallus gallus gga-mir-1624 precursor miRNA


Sequence

cuacugcugaacccugauggugccaggugaugucagcaggcaacaacACACCGCACUGGCAGGGAGCAggagugg
(((((.(((..(((((..(((((..((((.(((............))))))))))))..)))))..))).)))))

Structure
     g   aa     au     ca    a   cagca 
cuacu cug  cccug  ggugc  ggug ugu     g
||||| |||  |||||  |||||  |||| |||      
gguga gAC  GGGAC  UCACG  CCAC Aca     g
     g   GA     GG     --    -   acaac 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr6: 15805663-15805737 [-]

Database links

Mature gga-miR-1624

Accession MIMAT0007492
Description Gallus gallus gga-miR-1624 mature miRNA
Sequence 48 - ACACCGCACUGGCAGGGAGCA - 68
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964