Stem-loop gga-mir-1625

Accession

MI0007354

Description

Gallus gallus gga-mir-1625 precursor miRNA

Sequence

88 reads, 2 reads per million, 4 experiments

gcuguugggcuUGGACCAGGGCUCUUCCUGCUGGCUgguuccuggauaaGCAGCAGAAUAUCCCUGCCAUUcccugcugc
((.((.(((..(((..(((((...(((.(((((.((.(((....))).))))))))))...))))))))..))).)).))

Structure

  u  u   cu   AC     CUC   C     G  g   c 
gc gu ggg  UGG  CAGGG   UUC UGCUG CU guu c
|| || |||  |||  |||||   ||| ||||| || |||  
cg cg ccc  ACC  GUCCC   AAG ACGAC Ga uag u
  u  u   UU   --     UAU   -     -  a   g 

Annotation confidence Not enough data

Genome context

chr15: 7616546-7616625 [-]

Mature gga-miR-1625-5p

• Accession: MIMAT0007493
• Description: Gallus gallus gga-miR-1625-5p mature miRNA
• Sequence: 12 - UGGACCAGGGCUCUUCCUGCUGGCU - 36
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1625-3p

• Accession: MIMAT0007494
• Description: Gallus gallus gga-miR-1625-3p mature miRNA
• Sequence: 50 - GCAGCAGAAUAUCCCUGCCAUU - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964