miRBase entry: gga-mir-1628

Stem-loop gga-mir-1628


Accession
MI0007357
Description
Gallus gallus gga-mir-1628 precursor miRNA


Sequence

91 reads, 2 reads per million, 3 experiments
ggcuucuggaggcagugagaucacaacagcucaacuuccuucugugggcaaacaagaAAGAGCUCUUCCUGUUGUGACCuugcguuucucuccugcc
(((....((((((.(((((.(((((((((......(((.((((((......)).)))).)))......))))))))).))))))))))).....)))

Structure
   -uucu      a     a         cucaac   c    -  gg 
ggc     ggaggc gugag ucacaacag      uuc uucu gu  g
|||     |||||| ||||| |||||||||      ||| |||| ||   
ccg     ucuuug cguuC AGUGUUGUC      GAG Aaga ca  c
   uccuc      -     C         CUUCUC   A    a  aa 


Annotation confidence Not enough data
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Genome context
chr4: 1930776-1930872 [+]

Database links

Mature gga-miR-1628

Accession MIMAT0007499
Description Gallus gallus gga-miR-1628 mature miRNA
Sequence 58 - AAGAGCUCUUCCUGUUGUGACC - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964