Stem-loop gga-mir-1635

Accession

MI0007365

Description

Gallus gallus gga-mir-1635 precursor miRNA

Literature search

3 open access papers mention gga-mir-1635
(14 sentences)

Sequence

1309 reads, 1.0 reads per million, 168 experiments

ggaccugccgugagaaccccagUGCCCAGGCUGUGCUGUGCUCUGGGggcacgcucagcucuucccCUGGCACACAGCCUGGGAGCAgggaguccucgccucuugcc
((.....))(((((.(((((.((.((((((((((...(((((..(((((...((...))...))))).))))))))))))))).)).))).)).)))))........

Structure

ggaccugcc     a  -   a  G          GCU     CU     cac  u 
         gugag ac ccc gU CCCAGGCUGU   GUGCU  GGGgg   gc  
         ||||| || ||| || ||||||||||   |||||  |||||   || c
         cgcuc ug ggg CG GGGUCCGACA   CACGG  Ccccu   cg  
-ccguucuc     c  a   A  A          ---     -U     ucu  a 

Annotation confidence High

Genome context

21: 1734507-1734613 [-]

Mature gga-miR-1635-5p

• Accession: MIMAT0007508
• Description: Gallus gallus gga-miR-1635-5p mature miRNA
• Sequence: 23 - UGCCCAGGCUGUGCUGUGCUCUGGG - 47
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1635-3p

• Accession: MIMAT0051240
• Description: Gallus gallus gga-miR-1635-3p mature miRNA
• Sequence: 67 - CUGGCACACAGCCUGGGAGCA - 87
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964