Stem-loop gga-mir-1636

Accession

MI0007366

Description

Gallus gallus gga-mir-1636 precursor miRNA

Literature search

2 open access papers mention gga-mir-1636
(2 sentences)

Sequence

3573 reads, 4.0 reads per million, 176 experiments

caggcauccaucugcUGCCCCGUCACUCCUGAUACCGcugugcugguaaggUGCAGGUGAUGGCGGGGCUGccggugugccaugccug
((((((((((((.((.((((((((((.((((.(((((((.....)))..)))))))).).))))))))).)).)))).)..)))))))

Structure

       -- -    u  U         - U    A    --   g 
caggcau  c cauc gc GCCCCGUCA C CCUG UACC  Gcu u
|||||||  | |||| || ||||||||| | |||| ||||  ||| g
guccgua  g gugg cG CGGGGCGGU G GGAC GUgg  ugg c
       cc u    c  U         A U    -    aa   u 

Annotation confidence High

Genome context

15: 4710939-4711026 [+]

Mature gga-miR-1636-5p

• Accession: MIMAT0051241
• Description: Gallus gallus gga-miR-1636-5p mature miRNA
• Sequence: 16 - UGCCCCGUCACUCCUGAUACCG - 37
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1636-3p

• Accession: MIMAT0007509
• Description: Gallus gallus gga-miR-1636-3p mature miRNA
• Sequence: 52 - UGCAGGUGAUGGCGGGGCUG - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964