Stem-loop gga-mir-1651

Accession

MI0007383

Description

Gallus gallus gga-mir-1651 precursor miRNA

Sequence

142 reads, 2 reads per million, 5 experiments

uccaggggguggaaGCUAAGACUGAUAAAAGCAAGCaaauuauuuacaguUUGCUUUUGUUGGCCUCUGCUGccggguccugga
(((((((...((.(((..((.(((((((((((((((............))))))))))))))).))..))).))...)))))))

Structure

       ggu  a   UA  A               aaauu 
uccaggg   gg aGC  AG CUGAUAAAAGCAAGC     a
|||||||   || |||  || |||||||||||||||      
agguccu   cc UCG  UC GGUUGUUUUCGUUug     u
       ggg  G   UC  C               acauu 

Annotation confidence High

Genome context

chr1: 539155-539238 [+]

Mature gga-miR-1651-5p

• Accession: MIMAT0007529
• Description: Gallus gallus gga-miR-1651-5p mature miRNA
• Sequence: 15 - GCUAAGACUGAUAAAAGCAAGC - 36
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1651-3p

• Accession: MIMAT0007530
• Description: Gallus gallus gga-miR-1651-3p mature miRNA
• Sequence: 51 - UUGCUUUUGUUGGCCUCUGCUG - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964