Stem-loop gga-mir-1653

Accession

MI0007385

Description

Gallus gallus gga-mir-1653 precursor miRNA

Literature search

1 open access papers mention gga-mir-1653
(1 sentences)

Sequence

73 reads, 1 reads per million, 4 experiments

ucaggaccgcucuguucccauuuguaugcccagcacugguccuggugucugcuaugguuuccaCAGGAGCUGUGCUGCAUGCAGGuguggaugcagcaucuugg
.(((((..(((....((((((((((((((..(((((.(.(((((.((...((....))...))))))).).)))))))))))))))).)))...))).))))).

Structure

u     cc   cugu   -           cc     u g     g  ucu  u 
 cagga  gcu    ucc cauuuguaugc  agcac g uccug ug   gc a
 |||||  |||    ||| |||||||||||  ||||| | ||||| ||   ||  
 guucu  cga    agg guGGACGUACG  UCGUG C AGGAC ac   ug u
g     -a   -cgu   u           --     U G     -  cuu  g 

Annotation confidence Not enough data

Genome context

chr9: 14383845-14383948 [-]

Mature gga-miR-1653

• Accession: MIMAT0007532
• Description: Gallus gallus gga-miR-1653 mature miRNA
• Sequence: 64 - CAGGAGCUGUGCUGCAUGCAGG - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964