Stem-loop gga-mir-1662

Accession

MI0007396

Description

Gallus gallus gga-mir-1662 precursor miRNA mir-1662

Gene
family

RF02097; mir-1662

Literature search

6 open access papers mention gga-mir-1662
(20 sentences)

Sequence

1584970 reads, 916.0 reads per million, 237 experiments

ucuauggguUUGACAUCAUCAUACUUGGGAUguaugacacaaaguCCCAAGCAGGCUGAUGUCAGGCccaaga
(((.((((((((((((((.(...((((((((............))))))))...).)))))))))))))))))

Structure

   a              U AUA        guaug 
ucu uggguUUGACAUCA C   CUUGGGAU     a
||| |||||||||||||| |   ||||||||      
aga accCGGACUGUAGU G   GAACCCug     c
   -              C GAC        aaaca 

Annotation confidence High

Genome context

2: 1860949-1861021 [+]

Mature gga-miR-1662-5p

• Accession: MIMAT0007543
• Description: Gallus gallus gga-miR-1662-5p mature miRNA
• Sequence: 10 - UUGACAUCAUCAUACUUGGGAU - 31
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1662-3p

• Accession: MIMAT0051245
• Description: Gallus gallus gga-miR-1662-3p mature miRNA
• Sequence: 46 - CCCAAGCAGGCUGAUGUCAGGC - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964