Stem-loop gga-mir-1665

Accession

MI0007399

Description

Gallus gallus gga-mir-1665 precursor miRNA

Literature search

1 open access papers mention gga-mir-1665
(1 sentences)

Sequence

173 reads, 5.0 reads per million, 53 experiments

gauacgaggUAAGGCCCAGGAGCGCUGCAGCagggaugcugacagcugGAGUGUCUCAGGGCCUUGcuuucaaguguu
(((((((((((((((((..(((((((.((((..(........).)))).)))).))).))))))))))))...)))))

Structure

     ---            AG   -    G    ag gau 
gauac   gaggUAAGGCCC  GAG CGCU CAGC  g   g
|||||   ||||||||||||  ||| |||| ||||  |    
uugug   uuucGUUCCGGG  CUC GUGA gucg  c   c
     aac            -A   U    G    -a agu 

Annotation confidence Medium

Genome context

8: 19428764-19428841 [+]

Mature gga-miR-1665-5p

• Accession: MIMAT0007548
• Description: Gallus gallus gga-miR-1665-5p mature miRNA
• Sequence: 10 - UAAGGCCCAGGAGCGCUGCAGC - 31
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1665-3p

• Accession: MIMAT0051246
• Description: Gallus gallus gga-miR-1665-3p mature miRNA
• Sequence: 49 - GAGUGUCUCAGGGCCUUG - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964