Stem-loop gga-mir-1669

Accession

MI0007403

Description

Gallus gallus gga-mir-1669 precursor miRNA

Literature search

1 open access papers mention gga-mir-1669
(13 sentences)

Sequence

75 reads, 0.0 reads per million, 48 experiments

gcccccgcugccggcUGCGCUGCUCUGCGCCCAAACGGacgucgugcccggaaccGUGGGCUCAGAGCAGGCACAgcuggcggggaggggc
((((((.((((((((((.(((((((((.((((..((((...(((....)))..)))))))).))))))).)).)))))))))).).)))))

Structure

     - g          C  -       C    AA    acg   u 
gcccc c cugccggcUG GC UGCUCUG GCCC  ACGG   ucg g
||||| | |||||||||| || ||||||| ||||  ||||   |||  
cgggg g ggcggucgAC CG ACGAGAC CGGG  UGcc   ggc c
     a g          A  G       U    --    -aa   c 

Annotation confidence High

Genome context

26: 3667348-3667438 [+]

Mature gga-miR-1669-5p

• Accession: MIMAT0051247
• Description: Gallus gallus gga-miR-1669-5p mature miRNA
• Sequence: 16 - UGCGCUGCUCUGCGCCCAAACGG - 38
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1669-3p

• Accession: MIMAT0007553
• Description: Gallus gallus gga-miR-1669-3p mature miRNA
• Sequence: 56 - GUGGGCUCAGAGCAGGCACA - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964