Stem-loop gga-mir-1680

Accession

MI0007414

Description

Gallus gallus gga-mir-1680 precursor miRNA

Literature search

1 open access papers mention gga-mir-1680
(4 sentences)

Sequence

2 reads, 0 reads per million, 1 experiments

gcugggcacugcuUUCCUCCUGGGUACAACUCUGCugucuuuguacuuucuacuugCAGGCGGUAUCAGGAGGCUGAgcugugcccagc
(((((((((.((((.((((((((.(((..(.((((....................)))))..)))))))))))..)))).)))))))))

Structure

         u    -U        G   AA U    ugucuuugu 
gcugggcac gcuU  CCUCCUGG UAC  C CUGC         a
||||||||| ||||  |||||||| |||  | ||||          
cgacccgug cgAG  GGAGGACU AUG  G GACg         c
         u    UC        -   GC -    uucaucuuu 

Annotation confidence Not enough data

Genome context

chr10: 15878829-15878917 [+]

Mature gga-miR-1680-5p

• Accession: MIMAT0007566
• Description: Gallus gallus gga-miR-1680-5p mature miRNA
• Sequence: 14 - UUCCUCCUGGGUACAACUCUGC - 35
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1680-3p

• Accession: MIMAT0007567
• Description: Gallus gallus gga-miR-1680-3p mature miRNA
• Sequence: 57 - CAGGCGGUAUCAGGAGGCUGA - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964