Stem-loop gga-mir-1689

Accession

MI0007423

Description

Gallus gallus gga-mir-1689 precursor miRNA

Literature search

1 open access papers mention gga-mir-1689
(6 sentences)

Sequence

11 reads, 0 reads per million, 3 experiments

gguguuaugucugggcagaagaUCUCUGCUUACAGUGUCUGGGGggaucaugcggcagccCCGGUGACUGGAAGCAGCGUUGAcuucugggcaguucugucucc
((.(......(((..((((((..(.(((((..((((..((((((...((....))...))))))..))))..))))).)....))))))..)))......).))

Structure

  u uuaugu   gg      --aU U     UA    GU      gga  a 
gg g      cug  cagaag    C CUGCU  CAGU  CUGGGG   uc u
|| |      |||  ||||||    | |||||  ||||  ||||||   ||  
cc c      gac  gucuuc    G GACGA  GUCA  GGCCcc   gg g
  u ugucuu   gg      AGUU C     AG    GU      gac  c 

Annotation confidence Not enough data

Genome context

chr19: 9416330-9416433 [-]

Mature gga-miR-1689-5p

• Accession: MIMAT0007579
• Description: Gallus gallus gga-miR-1689-5p mature miRNA
• Sequence: 23 - UCUCUGCUUACAGUGUCUGGGG - 44
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1689-3p

• Accession: MIMAT0007580
• Description: Gallus gallus gga-miR-1689-3p mature miRNA
• Sequence: 61 - CCGGUGACUGGAAGCAGCGUUGA - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964