Stem-loop gga-mir-1690

Accession

MI0007424

Description

Gallus gallus gga-mir-1690 precursor miRNA

Sequence

396 reads, 2.0 reads per million, 70 experiments

gauggcuuccagcagggugcguaUCCAGAGGCAAAGGAGCACUGCUgcuaaaugggacacggCAGAGCUGCUUUCUCUGUGAUgaugcacucugcguagucauu
(((((((....((((((((((((((((((((..(((.(((.((((((............)))))).))).))))))))).))).)))))))))))..)))))))

Structure

       ucca           -   -      CA   G   A      cuaaa 
gauggcu    gcagggugcgu aUC CAGAGG  AAG AGC CUGCUg     u
|||||||    ||||||||||| ||| ||||||  ||| ||| ||||||      
uuacuga    cgucucacgua UAG GUCUCU  UUC UCG GACggc     g
       --ug           g   U      --   G   A      acagg 

Annotation confidence High

Genome context

1: 84085520-84085623 [+]

Mature gga-miR-1690-5p

• Accession: MIMAT0007581
• Description: Gallus gallus gga-miR-1690-5p mature miRNA
• Sequence: 24 - UCCAGAGGCAAAGGAGCACUGCU - 46
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1690-3p

• Accession: MIMAT0051248
• Description: Gallus gallus gga-miR-1690-3p mature miRNA
• Sequence: 63 - CAGAGCUGCUUUCUCUGUGAU - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964