Stem-loop gga-mir-1709

Accession

MI0007446

Description

Gallus gallus gga-mir-1709 precursor miRNA

Literature search

1 open access papers mention gga-mir-1709
(7 sentences)

Sequence

10 reads, 1 reads per million, 4 experiments

cuaggcUGGAAUGAUGAGUGCACUGACUggccaucuggugcucauggcagguuggucaguugucuguuaucucucaaaaugg
........((..(((((..(.((.(((((((((((((.(......).)))).))))))))))))..)))))..)).......

Structure

cuaggcUG  AU     GU C  U         -    g gc 
        GA  GAUGA  G AC GACUggcca ucug u  u
        ||  |||||  | || ||||||||| |||| |   
        cu  cuauu  c ug uugacuggu ggac g  c
-gguaaaa  cu     gu -  -         u    g ua 

Annotation confidence Not enough data

Genome context

chr1: 180999373-180999454 [+]

Mature gga-miR-1709

• Accession: MIMAT0007604
• Description: Gallus gallus gga-miR-1709 mature miRNA
• Sequence: 7 - UGGAAUGAUGAGUGCACUGACU - 28
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964