miRBase entry: gga-mir-1713

Stem-loop gga-mir-1713


Accession
MI0007450
Description
Gallus gallus gga-mir-1713 precursor miRNA


Sequence

2 reads, 0 reads per million, 1 experiments
cuugaaaauaccccucccggccccccguugcccgcucaaagucugugacaaguuggCUCGGAGAGGGAAGAACGCGGUGcucgggagggagaugccaag
((((...((..((((((((((.((.((((.(((.(((..((((...........))))..))).)))...)))).)).)).))))))))..))..))))

Structure
    aaa  ac        -  c  c    --g   g   aa    ugug 
cuug   au  cccucccg gc cc cguu   ccc cuc  aguc    a
||||   ||  |||||||| || || ||||   ||| |||  ||||    c
gaac   ua  gggagggc cG GG GCAA   GGG GAG  UCgg    a
    -cg  ga        u  U  C    GAA   A   GC    uuga 


Annotation confidence Not enough data
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Genome context
chr7: 16338832-16338930 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from gga-mir-1713
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gga-miR-1713

Accession MIMAT0007609
Description Gallus gallus gga-miR-1713 mature miRNA
Sequence 57 - CUCGGAGAGGGAAGAACGCGGUG - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964