Stem-loop gga-mir-1715

Accession

MI0007452

Description

Gallus gallus gga-mir-1715 precursor miRNA

Literature search

1 open access papers mention gga-mir-1715
(1 sentences)

Sequence

8 reads, 0 reads per million, 2 experiments

ggcuaagagaaggaagcagAGGAUCAGUAGAAGUCAGCUGUGCaggcagugcugagcgaugcagcUGACACUGCGGGUACCUCUUUuccaugcucuguaacc
((...(((((.(((((.((((((((.((((..(((((((((((.(((...)))..))...))))))))).)))).))).)))))))))).).))))....))

Structure

  -cua    - a     c     -   A    AA         ---  -a   a 
gg    agag a ggaag agAGG AUC GUAG  GUCAGCUGU   GC  ggc  
||    |||| | ||||| ||||| ||| ||||  |||||||||   ||  ||| g
cc    ucuc u ccuUU UCUCC UGG CGUC  CAGUcgacg   cg  ucg  
  aaug    g a     -     A   G    -A         uag  ag   u 

Annotation confidence Not enough data

Genome context

chr14: 14307704-14307805 [-]

Mature gga-miR-1715-5p

• Accession: MIMAT0007611
• Description: Gallus gallus gga-miR-1715-5p mature miRNA
• Sequence: 20 - AGGAUCAGUAGAAGUCAGCUGUGC - 43
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1715-3p

• Accession: MIMAT0007612
• Description: Gallus gallus gga-miR-1715-3p mature miRNA
• Sequence: 66 - UGACACUGCGGGUACCUCUUU - 86
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964