Stem-loop gga-mir-1723

Accession

MI0007460

Description

Gallus gallus gga-mir-1723 precursor miRNA

Literature search

1 open access papers mention gga-mir-1723
(1 sentences)

Sequence

460 reads, 1.0 reads per million, 135 experiments

gcugcaugaggcucagcccugcagaGAGCUGCACAUUUCGUGUCCcaccucaugcugcUGGGAGCGGAAUGUGCAGCCUCAcugcuguacugaagcacugccaggc
((((((.(..((((((..(.((((.((((((((((((((((.(((((.(.......).)))))))))))))))))).))).)))).)..))).))).))))..)))

Structure

   --   u ag   -   cc u    a   -             G     c uc 
gcu  gca g  gcu cag  c gcag GAG CUGCACAUUUCGU UCCca c  a
|||  ||| |  ||| |||  | |||| ||| ||||||||||||| ||||| |  u
cgg  cgu c  cga guc  g cguc CUC GACGUGUAAGGCG AGGGU g  g
   ac   - -a   a   au u    A   C             -     c uc 

Annotation confidence Medium

Genome context

2: 41273109-41273214 [-]

Mature gga-miR-1723-5p

• Accession: MIMAT0051254
• Description: Gallus gallus gga-miR-1723-5p mature miRNA
• Sequence: 26 - GAGCUGCACAUUUCGUGUCC - 45
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1723-3p

• Accession: MIMAT0007622
• Description: Gallus gallus gga-miR-1723-3p mature miRNA
• Sequence: 59 - UGGGAGCGGAAUGUGCAGCCUCA - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964