Stem-loop gga-mir-1731

Accession

MI0007470

Description

Gallus gallus gga-mir-1731 precursor miRNA

Sequence

88 reads, 1 reads per million, 5 experiments

cuuggccucugcuggaagccggguACUUGACUGCAGGCACUGCUGCUcuguuccagauUGGCAGUUCCUUGGUCUUGUCCuugucuccaguuccuuccuaag
(((((.....((((((.((.(((.((..(((((.(((.(((((((.((((...)))).))))))).))))))))..))))).)).))))))......)))))

Structure

     -ccucu      a  c   u  UU     C   C       C    u 
cuugg      gcugga gc ggg AC  GACUG AGG ACUGCUG Ucug  
|||||      |||||| || ||| ||  ||||| ||| ||||||| |||| u
gaauc      ugaccu ug uCC UG  CUGGU UCC UGACGGU agac  
     cuuccu      c  u   -  UU     -   U       u    c 

Annotation confidence Not enough data

Genome context

chr12: 10660971-10661072 [-]

Mature gga-miR-1731-5p

• Accession: MIMAT0007633
• Description: Gallus gallus gga-miR-1731-5p mature miRNA
• Sequence: 25 - ACUUGACUGCAGGCACUGCUGCU - 47
• Evidence: experimental ; Illumina [1-2]

Mature gga-miR-1731-3p

• Accession: MIMAT0026780
• Description: Gallus gallus gga-miR-1731-3p mature miRNA
• Sequence: 59 - UGGCAGUUCCUUGGUCUUGUCC - 80
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45