Stem-loop gga-mir-1749

Accession

MI0007489

Description

Gallus gallus gga-mir-1749 precursor miRNA

Literature search

1 open access papers mention gga-mir-1749
(4 sentences)

Sequence

2 reads, 1 reads per million, 2 experiments

gagugcagcuggagggcuacagggAGAUAAGGAACUGAACUGGCUgcaucucugcugcUUGGCUCUGUUCCCUAUUUCCcgucuccuuagcaaaucuc
(((....((((.((((..((.((((((((.(((((.((.(.(((.(((....))).))).)..)).))))).)))))))))).))))))))....)))

Structure

   ugca    g    cu  a        A     U  -A U   U   u 
gag    gcug aggg  ac gggAGAUA GGAAC GA  C GGC gca c
|||    |||| ||||  || |||||||| ||||| ||  | ||| |||  
cuc    cgau uccu  ug cCCUUUAU CCUUG CU  G Ucg cgu u
   uaaa    -    -c  -        C     U  CG U   u   c 

Annotation confidence Not enough data

Genome context

chr2: 573269-573366 [+]

Mature gga-miR-1749-5p

• Accession: MIMAT0007654
• Description: Gallus gallus gga-miR-1749-5p mature miRNA
• Sequence: 25 - AGAUAAGGAACUGAACUGGCU - 45
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1749-3p

• Accession: MIMAT0007655
• Description: Gallus gallus gga-miR-1749-3p mature miRNA
• Sequence: 59 - UUGGCUCUGUUCCCUAUUUCC - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964