Stem-loop gga-mir-1781

Accession

MI0007524

Description

Gallus gallus gga-mir-1781 precursor miRNA mir-1781

Gene
family

RF03208; mir-1781

Sequence

922 reads, 14 reads per million, 5 experiments

ggagacaaggagcguguuuAACAGCUGAGUGAUUUAAAGCAaucaaauuccuuuggcUUUAAAUCAUGCAGCUGUUGAacaagcucuugcuuc
((((.((((.(((.(((((((((((((.((((((((((((...((((....)))))))))))))))).))))))))))))).)))))))))))

Structure

    a    g   g             A            Aau    u 
ggag caag agc uguuuAACAGCUG GUGAUUUAAAGC   caaa u
|||| |||| ||| ||||||||||||| ||||||||||||   ||||  
cuuc guuc ucg acaAGUUGUCGAC UACUAAAUUUcg   guuu c
    -    -   a             G            ---    c 

Annotation confidence Not enough data

Genome context

chr14: 3325512-3325604 [-]

Mature gga-miR-1781-5p

• Accession: MIMAT0007692
• Description: Gallus gallus gga-miR-1781-5p mature miRNA
• Sequence: 20 - AACAGCUGAGUGAUUUAAAGCA - 41
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1781-3p

• Accession: MIMAT0007693
• Description: Gallus gallus gga-miR-1781-3p mature miRNA
• Sequence: 58 - UUUAAAUCAUGCAGCUGUUGA - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964