Stem-loop gga-mir-1784

Accession

MI0007527

Description

Gallus gallus gga-mir-1784 precursor miRNA

Literature search

1 open access papers mention gga-mir-1784
(1 sentences)

Sequence

2864 reads, 4.0 reads per million, 133 experiments

uggaccaauuucuuggggcccaaUUCUGCUCUUAUUGAAAUCAGUgagaguucugccauUGACUUAAAUAGGAGCAGAAUUGGgaccuaagaagagauuucca
((((....(((((((((.((((((((((((((((((....((((((..........))))))....)))))))))))))))))).))))))))).....))))

Structure

    -ccaa         g                  GAAA      agag 
ugga     uuucuuggg cccaaUUCUGCUCUUAUU    UCAGUg    u
||||     ||||||||| ||||||||||||||||||    ||||||     
accu     gaagaaucc gGGUUAAGACGAGGAUAA    AGUuac    u
    uuaga         a                  AUUC      cguc 

Annotation confidence High

Genome context

3: 35315809-35315911 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from gga-mir-1784

Mature gga-miR-1784-5p

• Accession: MIMAT0007696
• Description: Gallus gallus gga-miR-1784-5p mature miRNA
• Sequence: 24 - UUCUGCUCUUAUUGAAAUCAGU - 45
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1784-3p

• Accession: MIMAT0051265
• Description: Gallus gallus gga-miR-1784-3p mature miRNA
• Sequence: 60 - UGACUUAAAUAGGAGCAGAAUUGG - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964