Stem-loop gga-mir-1786

Accession

MI0007529

Description

Gallus gallus gga-mir-1786 precursor miRNA

Literature search

3 open access papers mention gga-mir-1786
(18 sentences)

Sequence

13392 reads, 9.0 reads per million, 199 experiments

ucugcucccugacugcuucuaauuccuUAACACAACAGGAAACAAAUUCagcauuaaaauaugAUUCUUUUCUGCUGUGUUACUgaauuaaaaguacuucaaagagaga
(((.(((..(((.(((((.((((((..(((((((.(((((((.....(((...........)))...))))))).)))))))..)))))).)))))..)))..))))))

Structure

   g   cc   -c     c      cu       A       CAAAU   gcau 
ucu cuc  uga  ugcuu uaauuc  UAACACA CAGGAAA     UCa    u
||| |||  |||  ||||| ||||||  ||||||| |||||||     |||    a
aga gag  acu  augaa auuaag  AUUGUGU GUCUUUU     Agu    a
   -   aa   uc     a      UC       C       --CUU   auaa 

Annotation confidence High

Genome context

14: 7740180-7740288 [+]

Mature gga-miR-1786-5p

• Accession: MIMAT0051267
• Description: Gallus gallus gga-miR-1786-5p mature miRNA
• Sequence: 28 - UAACACAACAGGAAACAAAUUC - 49
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1786-3p

• Accession: MIMAT0007698
• Description: Gallus gallus gga-miR-1786-3p mature miRNA
• Sequence: 64 - AUUCUUUUCUGCUGUGUUACU - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964