Stem-loop gga-mir-1797

Accession

MI0007540

Description

Gallus gallus gga-mir-1797 precursor miRNA

Sequence

251 reads, 1.0 reads per million, 87 experiments

gggcugaggcucgcaguccaAGUCUCUGCCCAGGACCAACUGCUGcagccacaacaGCUUGGAACUGAGCAGGAACUGcacagcugugguuuccauggccu
((((((((((.((((((...(((.(((((.(((..(((((((.((......)).))).))))..))).))))).))).....)))))))))))...)))))

Structure

     ---     u      --cca   C     C   GA    -   C  ca 
gggcu   gaggc cgcagu     AGU UCUGC CAG  CCAA CUG UG  g
|||||   ||||| ||||||     ||| ||||| |||  |||| ||| ||   
uccgg   cuuug gugucg     UCA GGACG GUC  GGUU Gac ac  c
     uac     -      acacG   A     A   AA    C   a  ac 

Annotation confidence Medium

Genome context

26: 2315011-2315111 [-]

Mature gga-miR-1797-5p

• Accession: MIMAT0051268
• Description: Gallus gallus gga-miR-1797-5p mature miRNA
• Sequence: 21 - AGUCUCUGCCCAGGACCAACUGCUG - 45
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1797-3p

• Accession: MIMAT0007711
• Description: Gallus gallus gga-miR-1797-3p mature miRNA
• Sequence: 57 - GCUUGGAACUGAGCAGGAACUG - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964