Stem-loop gga-mir-1798

Accession

MI0007542

Description

Gallus gallus gga-mir-1798 precursor miRNA

Literature search

2 open access papers mention gga-mir-1798
(4 sentences)

Sequence

337 reads, 1.0 reads per million, 87 experiments

cucauaauuaguuuuauucaguuAACGUGACACUUUAGAAAACCUguaaugcuauaaguggUUUUCAGAAGUGUAGCGUUUaugggauaaagugag
(((((.......(((((((.((.(((((.(((((((.(((((((...............))))))).))))))).))))).)).))))))))))))

Structure

     aauuagu       a  u     G       A       Uguaau 
cucau       uuuauuc gu AACGU ACACUUU GAAAACC      g
|||||       ||||||| || ||||| ||||||| |||||||      c
gagug       aaauagg ua UUGCG UGUGAAG CUUUUgg      u
     -------       g  U     A       A       ugaaua 

Annotation confidence High

Genome context

20: 10022190-10022285 [-]

Mature gga-miR-1798-5p

• Accession: MIMAT0007713
• Description: Gallus gallus gga-miR-1798-5p mature miRNA
• Sequence: 24 - AACGUGACACUUUAGAAAACCU - 45
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1798-3p

• Accession: MIMAT0007714
• Description: Gallus gallus gga-miR-1798-3p mature miRNA
• Sequence: 62 - UUUUCAGAAGUGUAGCGUUU - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964