Stem-loop gga-mir-1801

Accession

MI0007545

Description

Gallus gallus gga-mir-1801 precursor miRNA

Sequence

253 reads, 1.0 reads per million, 43 experiments

ugggaggaaauggacuauggguCCCGGCAUGCUGCACUGUCCUGuagaggcugcgccggCAGUGCGGCAUGCUGGGGGcuguagugucagcuccagaccccca
.(((.(((..((((((((((.((((((((((((((((((((.(((((...)))))..)))))))))))))))))))).))))))).)))..)))...)))...

Structure

--u   --a   aa   -       g                    -C     a 
   ggg   gga  ugg acuaugg uCCCGGCAUGCUGCACUGUC  UGuag  
   |||   |||  ||| ||||||| ||||||||||||||||||||  ||||| g
   ccc   ccu  acu ugauguc GGGGUCGUACGGCGUGACgg  gcguc  
acc   aga   cg   g       G                    cc     g 

Annotation confidence High

Genome context

8: 3820451-3820553 [-]

Mature gga-miR-1801-5p

• Accession: MIMAT0007717
• Description: Gallus gallus gga-miR-1801-5p mature miRNA
• Sequence: 23 - CCCGGCAUGCUGCACUGUCCUG - 44
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1801-3p

• Accession: MIMAT0051269
• Description: Gallus gallus gga-miR-1801-3p mature miRNA
• Sequence: 60 - CAGUGCGGCAUGCUGGGGG - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964