Stem-loop gga-mir-1808

Accession

MI0007553

Description

Gallus gallus gga-mir-1808 precursor miRNA

Literature search

1 open access papers mention gga-mir-1808
(1 sentences)

Sequence

474 reads, 1.0 reads per million, 98 experiments

cuauuugugucuucaggcUUUGUUGGGAAUGAAUACAUAUUguucugcaaacaCAUAUGGUCAAUUCCCAUCACCUccugaggcagacuag
......((.((((((((...((.(((((((.....(((((((((.....)))).)))))....))))))).))...))))))).).))...

Structure

cuauuu  g -       cUU  U       GAAUA     -    c 
      gu u cuucagg   UG UGGGAAU     CAUAU Uguu u
      || | |||||||   || |||||||     ||||| |||| g
      ca a ggagucc   AC ACCCUUA     GUAUA acaa c
---gau  g c       UCC  U       -ACUG     C    a 

Annotation confidence High

Genome context

5: 1164731-1164821 [-]

Mature gga-miR-1808-5p

• Accession: MIMAT0007726
• Description: Gallus gallus gga-miR-1808-5p mature miRNA
• Sequence: 19 - UUUGUUGGGAAUGAAUACAUAUU - 41
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1808-3p

• Accession: MIMAT0051270
• Description: Gallus gallus gga-miR-1808-3p mature miRNA
• Sequence: 54 - CAUAUGGUCAAUUCCCAUCACCU - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964