Stem-loop mml-mir-1-2

Accession

MI0007569

Description

Macaca mulatta mml-mir-1-2 precursor miRNA

Literature search

4 open access papers mention mml-mir-1-2
(54 sentences)

Sequence

117303771 reads, 20925.0 reads per million, 124 experiments

cagaguACAUACUUCUUUAUGUACCCAUaugaacauacaaugcuaUGGAAUGUAAAGAAGUAUGUAUuuuug
.(((((((((((((((((((((..(((((..(........)..))))).)))))))))))))))))))))..

Structure

-c                     AC     ug aca 
  agaguACAUACUUCUUUAUGU  CCAUa  a   u
  |||||||||||||||||||||  |||||  |    
  uuuUAUGUAUGAAGAAAUGUA  GGUau  u   a
gu                     -A     cg aac 

Annotation confidence High

Genome context

18: 60575935-60576006 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mml-mir-1-2

Mature mml-miR-1-2-5p

• Accession: MIMAT0031099
• Description: Macaca mulatta mml-miR-1-2-5p mature miRNA
• Sequence: 7 - ACAUACUUCUUUAUGUACCCAU - 28
• Evidence: experimental ; Illumina [2]

Mature mml-miR-1-3p

• Accession: MIMAT0006150
• Description: Macaca mulatta mml-miR-1-3p mature miRNA
• Sequence: 46 - UGGAAUGUAAAGAAGUAUGUAU - 67
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45