Stem-loop mml-let-7c

Accession

MI0007574

Description

Macaca mulatta mml-let-7c precursor miRNA

Literature search

4 open access papers mention mml-let-7c
(7 sentences)

Sequence

1691658 reads, 13672 reads per million, 8 experiments

gcauccggguUGAGGUAGUAGGUUGUAUGGUUuagaguuacacccugggaguuaaCUGUACAACCUUCUAGCUUUCCuuggagc
((.((((((..(((.(((.(((((((((((((..((.(..((...))..).))))))))))))))).))).)))..))))))))

Structure

  a      uU   G   U             ua  g ua  c 
gc uccggg  GAG UAG AGGUUGUAUGGUU  ga u  ca  
|| ||||||  ||| ||| |||||||||||||  || |  || c
cg agguuC  UUC AUC UCCAACAUGUCaa  uu a  gu  
  -      CU   G   U             --  g gg  c 

Annotation confidence Medium

Genome context

chr3: 31070403-31070486 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mml-let-7c

Mature mml-let-7c-5p

• Accession: MIMAT0006153
• Description: Macaca mulatta mml-let-7c-5p mature miRNA
• Sequence: 11 - UGAGGUAGUAGGUUGUAUGGUU - 32
• Evidence: experimental ; Illumina [2]

Mature mml-let-7c-3p

• Accession: MIMAT0026791
• Description: Macaca mulatta mml-let-7c-3p mature miRNA
• Sequence: 56 - CUGUACAACCUUCUAGCUUUCC - 77
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45