Stem-loop mml-mir-16-2

Accession

MI0007589

Description

Macaca mulatta mml-mir-16-2 precursor miRNA mir-15

Gene
family

RF00455; mir-15

Literature search

3 open access papers mention mml-mir-16-2
(4 sentences)

Sequence

69394 reads, 653 reads per million, 9 experiments

guuccacucUAGCAGCACGUAAAUAUUGGCGuagugaaauauguauuaaacaCCAAUAUUACUGUGCUGCUUCAgugugac
(((.((((..(((((((((..((((((((.((((((.......))))..)).))))))))..)))))))))..)))).)))

Structure

   c    cU         UA        C  --    aa 
guu cacu  AGCAGCACG  AAUAUUGG Gu  agug  a
||| ||||  |||||||||  |||||||| ||  ||||  u
cag gugA  UCGUCGUGU  UUAUAACC ca  uuau  a
   u    CU         CA        a  aa    gu 

Annotation confidence High

Genome context

chr2: 134308544-134308624 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mml-mir-16-2

Mature mml-miR-16-5p

• Accession: MIMAT0002651
• Description: Macaca mulatta mml-miR-16-5p mature miRNA
• Sequence: 10 - UAGCAGCACGUAAAUAUUGGCG - 31
• Evidence: experimental ; Illumina [2]

Mature mml-miR-16-2-3p

• Accession: MIMAT0031018
• Description: Macaca mulatta mml-miR-16-2-3p mature miRNA
• Sequence: 53 - CCAAUAUUACUGUGCUGCUUCA - 74
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45