Stem-loop mml-mir-29c

Accession

MI0007598

Description

Macaca mulatta mml-mir-29c precursor miRNA

Literature search

10 open access papers mention mml-mir-29c
(15 sentences)

Sequence

978812 reads, 801.0 reads per million, 151 experiments

aucucuuacacaggcugACCGAUUUCUCCUGGUGUUCAGAgucuguuuuugucUAGCACCAUUUGAAAUCGGUUAugauguaggggga
..((((((((((...(((((((((((...(((((((.(((...........))))))))))...))))))))))))).))))))))..

Structure

au        -  ggc           UCC       C   gucu 
  cucuuaca ca   ugACCGAUUUC   UGGUGUU AGA    g
  |||||||| ||   |||||||||||   ||||||| |||    u
  ggggaugu gu   AUUGGCUAAAG   ACCACGA Ucu    u
ag        a  ---           UUU       -   guuu 

Annotation confidence High

Genome context

1: 65298819-65298906 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mml-mir-29c

Mature mml-miR-29c-5p

• Accession: MIMAT0026804
• Description: Macaca mulatta mml-miR-29c-5p mature miRNA
• Sequence: 18 - ACCGAUUUCUCCUGGUGUUCAGA - 40
• Evidence: experimental ; Illumina [2]

Mature mml-miR-29c-3p

• Accession: MIMAT0006169
• Description: Macaca mulatta mml-miR-29c-3p mature miRNA
• Sequence: 54 - UAGCACCAUUUGAAAUCGGUUA - 75
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45