Stem-loop mml-mir-99b

Accession

MI0007609

Description

Macaca mulatta mml-mir-99b precursor miRNA

Literature search

2 open access papers mention mml-mir-99b
(4 sentences)

Sequence

1419941 reads, 11494 reads per million, 8 experiments

ggcaccCACCCGUAGAACCGACCUUGCGgggccuucgccgcacacAAGCUCGUGUCUGUGGGUCCGuguc
(((((..(((((((((..(((.((((.(.(((....))).)...)))).)))..)))))))))..)))))

Structure

     cC         AC   C    --C g   c 
ggcac  ACCCGUAGA  CGA CUUG   G ggc u
|||||  |||||||||  ||| ||||   | |||  
cuguG  UGGGUGUCU  GCU GAAc   c ccg u
     CC         GU   C    aca g   c 

Annotation confidence High

Genome context

chr19: 46927837-46927906 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from mml-mir-99b

Mature mml-miR-99b-5p

• Accession: MIMAT0006179
• Description: Macaca mulatta mml-miR-99b-5p mature miRNA
• Sequence: 7 - CACCCGUAGAACCGACCUUGCG - 28
• Evidence: experimental ; Illumina [2]

Mature mml-miR-99b-3p

• Accession: MIMAT0026812
• Description: Macaca mulatta mml-miR-99b-3p mature miRNA
• Sequence: 46 - AAGCUCGUGUCUGUGGGUCCG - 66
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45