Stem-loop mml-mir-136

Accession

MI0007626

Description

Macaca mulatta mml-mir-136 precursor miRNA mir-136

Gene
family

RF00687; mir-136

Literature search

6 open access papers mention mml-mir-136
(8 sentences)

Sequence

141502 reads, 191.0 reads per million, 119 experiments

uuggaugagcccucggaggACUCCAUUUGUUUUGAUGAUGGAuucuuaugcucCAUCAUCGUCUCAAAUGAGUCUUcagaggguucuaucau
...(((((((((((.((((((((.(((((...((((((((((.........))))))))))...))))))))))))).)))))))).)))..

Structure

uug   -        g        C     UUU          uuc 
   gau gagcccuc gaggACUC AUUUG   UGAUGAUGGA   u
   ||| |||||||| |||||||| |||||   ||||||||||   u
   cua cuugggag cUUCUGAG UAAAC   GCUACUACcu   a
-ua   u        a        -     UCU          cgu 

Annotation confidence High

Genome context

7: 163105276-163105367 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from mml-mir-136

Mature mml-miR-136-5p

• Accession: MIMAT0006192
• Description: Macaca mulatta mml-miR-136-5p mature miRNA
• Sequence: 20 - ACUCCAUUUGUUUUGAUGAUGGA - 42
• Evidence: not_experimental

Mature mml-miR-136-3p

• Accession: MIMAT0061177
• Description: Macaca mulatta mml-miR-136-3p mature miRNA
• Sequence: 54 - CAUCAUCGUCUCAAAUGAGUCUU - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8