Stem-loop mml-mir-148b

Accession

MI0007639

Description

Macaca mulatta mml-mir-148b precursor miRNA mir-148

Gene
family

RF00248; mir-148

Sequence

100201 reads, 870 reads per million, 8 experiments

caagcacgauuagcauuugagguGAAGUUCUGUUAUACACUCAGGCUguggcucucugaaagUCAGUGCAUCACAGAACUUUGUcucgaaagcuuucua
.......((..(((.((((((((((((((((((.((.((((..((((.............)))))))).)).)))))))))))))))))).))).))..

Structure

caagcac  uu   a                  U  A    CA    guggc 
       ga  agc uuugagguGAAGUUCUGU AU CACU  GGCU     u
       ||  ||| |||||||||||||||||| || ||||  ||||     c
       cu  ucg aagcucUGUUUCAAGACA UA GUGA  CUga     u
-----au  -u   a                  C  C    --    aaguc 

Annotation confidence Medium

Genome context

chr11: 53018095-53018193 [+]

Mature mml-miR-148b-3p

• Accession: MIMAT0006209
• Description: Macaca mulatta mml-miR-148b-3p mature miRNA
• Sequence: 63 - UCAGUGCAUCACAGAACUUUGU - 84
• Evidence: experimental ; Illumina [2]

Mature mml-miR-148b-5p

• Accession: MIMAT0026826
• Description: Macaca mulatta mml-miR-148b-5p mature miRNA
• Sequence: 24 - GAAGUUCUGUUAUACACUCAGGCU - 47
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45