Stem-loop mml-mir-149

Accession

MI0007640

Description

Macaca mulatta mml-mir-149 precursor miRNA mir-149

Gene
family

RF00829; mir-149

Literature search

2 open access papers mention mml-mir-149
(24 sentences)

Sequence

104338 reads, 677 reads per million, 8 experiments

gccggcgcccaagcUCUGGCUCCGUGUCUUCACUCCCguguuuguccgaggaggGAGGGAGGGACGGGGGCUGUGCuggggcagccgga
.(((((((((.(((.(.(.((((((.(((((.(((((.(.((.....)).).)))))))))).)))))).).).))).)))).))))).

Structure

g     -    a   U U G      G     A     g g  u 
 ccggc gccc agc C G CUCCGU UCUUC CUCCC u uu g
 ||||| |||| ||| | | |||||| ||||| ||||| | || u
 ggccg cggg uCG G C GGGGCA GGAGG GAGgg g ag c
a     a    g   U U G      G     -     a g  c 

Annotation confidence High

Genome context

chr12: 123188632-123188720 [+]

Mature mml-miR-149-5p

• Accession: MIMAT0006210
• Description: Macaca mulatta mml-miR-149-5p mature miRNA
• Sequence: 15 - UCUGGCUCCGUGUCUUCACUCCC - 37
• Evidence: experimental ; Illumina [2]

Mature mml-miR-149-3p

• Accession: MIMAT0026827
• Description: Macaca mulatta mml-miR-149-3p mature miRNA
• Sequence: 55 - GAGGGAGGGACGGGGGCUGUGC - 76
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45