Stem-loop mml-mir-154

Accession

MI0007644

Description

Macaca mulatta mml-mir-154 precursor miRNA

Literature search

1 open access papers mention mml-mir-154
(1 sentences)

Sequence

925 reads, 7 reads per million, 8 experiments

gagguacuugaagaUAGGUUAUCCGUGUUGCCUUCGcuuuauuugugacgAAUCAUACACGGUUGACCUAUUuuucaguaccaa
..((((((.((((((((((((.((((((((.(.((((.......)))).)...)).)))))).)))))))))))).))))))..

Structure

ga      u            U      -  --C U    uu 
  gguacu gaagaUAGGUUA CCGUGU UG   C UCGc  u
  |||||| |||||||||||| |||||| ||   | ||||  a
  ccauga uuuUUAUCCAGU GGCACA AC   g agug  u
aa      c            U      U  UAA c    uu 

Annotation confidence High

Genome context

chr7: 163393750-163393833 [+]

Clustered miRNAs

14 other miRNAs are < 10 kb from mml-mir-154

Mature mml-miR-154-5p

• Accession: MIMAT0006215
• Description: Macaca mulatta mml-miR-154-5p mature miRNA
• Sequence: 15 - UAGGUUAUCCGUGUUGCCUUCG - 36
• Evidence: experimental ; Illumina [2]

Mature mml-miR-154-3p

• Accession: MIMAT0026830
• Description: Macaca mulatta mml-miR-154-3p mature miRNA
• Sequence: 51 - AAUCAUACACGGUUGACCUAUU - 72
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45