Stem-loop mml-mir-194-2

Accession

MI0007657

Description

Macaca mulatta mml-mir-194-2 precursor miRNA mir-194

Gene
family

RF00257; mir-194

Literature search

1 open access papers mention mml-mir-194-2
(1 sentences)

Sequence

94598 reads, 729 reads per million, 8 experiments

uggcucccgcccccUGUAACAGCAACUCCAUGUGGAaguguccacugauucCAGUGGGGCUGCUGUUAUCUGgggcgagggccgg
((((((.((((((..(((((((((.((((((.(((((...........))))))))))).)))))))))..)))))).)))))).

Structure

-      c      cU         A      G     gugu 
 uggcuc cgcccc  GUAACAGCA CUCCAU UGGAa    c
 |||||| ||||||  ||||||||| |||||| |||||    c
 gccggg gcgggG  UAUUGUCGU GGGGUG ACcuu    a
g      a      UC         C      -     aguc 

Annotation confidence High

Genome context

chr14: 9567012-9567096 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mml-mir-194-2

Mature mml-miR-194-5p

• Accession: MIMAT0002727
• Description: Macaca mulatta mml-miR-194-5p mature miRNA
• Sequence: 15 - UGUAACAGCAACUCCAUGUGGA - 36
• Evidence: experimental ; Illumina [2]

Mature mml-miR-194-3p

• Accession: MIMAT0026837
• Description: Macaca mulatta mml-miR-194-3p mature miRNA
• Sequence: 52 - CAGUGGGGCUGCUGUUAUCUG - 72
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45